PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01153.1.g00180.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Nin-like
Protein Properties Length: 366aa    MW: 40673.1 Da    PI: 6.7148
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01153.1.g00180.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK53.74e-173173432652
                          RWP-RK  26 gvclTvLKriCRqyGIkRWPhRkiksl 52 
                                     +vc+T++KriCRq+GI+RWP+Rki+++
  Zmw_sc01153.1.g00180.1.sm.mkhc 317 EVCPTTMKRICRQHGISRWPSRKINKV 343
                                     5************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151911.82261364IPR003035RWP-RK domain
PfamPF020421.9E-14317343IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MDLDPSPSSA PGDGACGSGD VRPFDTLTTS LLFSSVSTSQ PLPPLPANSS SWLTPPSPLW  60
LFEDRQLLPI ETPAALPEAA AAVVDEVQRA RSGNSDTTTK RVEQINQKWQ LHLSLDDDVT  120
ENSSLFKERL TQALRYFKDS TDQHLLVQVW APVKNGDRYV LTTSGQPFVL DHQSIGLVQY  180
RAVSMMYMFS VDGDNAGELG LPGRVYKQKV PEWTPNVQYY SSKEYPRLNH AISYNVHGTV  240
ALPVFDPSAQ ACIAVVELIM TSKKINYACE VDKVCKALEA VNLKSTEIFD HPNVQNEEFK  300
KDVKIDSSEG GISESPEVCP TTMKRICRQH GISRWPSRKI NKVNRSLSKL KQTKLLTREA  360
HLEKAA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002457049.11e-169hypothetical protein SORBIDRAFT_03g000490
SwissprotQ5NB821e-154NLP3_ORYSJ; Protein NLP3
TrEMBLC5XJJ31e-169C5XJJ3_SORBI; Putative uncharacterized protein Sb03g000490
STRINGSb03g000490.11e-168(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47783660